RESEARCH PROGRAMMER II (SOFTWARE ENGINEER) - C. Wu Lab
Company: Scripps Research
Location: San Diego
Posted on: April 1, 2026
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Job Description:
ABOUT US: Scripps Research is ranked one of the most influential
institutions in the world for its impact on innovation. We expand
basic knowledge in the biosciences and use these fundamental
advancements to develop profound innovations that improve
wellbeing. Our educational and training programs mold talented and
committed students and postdocs into leading edge scientists.
Scientists in the institute’s five academic research departments
work hand-in-hand with researchers of the Scripps Research
Translational Institute and Calibr to merge foundational studies in
biology, chemistry and computer science with translational science
to produce pioneering drugs and advances in digital and precision
medicine. Together, we cultivate new scientific leaders and expand
the frontiers of knowledge to deliver medical breakthroughs to
better human health around the globe. If you have a passion for
making a difference, this could be your opportunity to join our
transformative team. POSITION TITLE: Research Programmer II
(Software Engineer) POSITION SUMMARY: The hiring laboratory is
involved in numerous projects to build software infrastructure and
tools for bioinformatics, genetics, and genomics research. We have
a particular emphasis on building large scale data integration
infrastructure and on community platforms that enable collaboration
and crowdsourcing. Representative projects include outbreak.info,
the BioThings SDK for building APIs (biothings.io), and
mygene.info. The broader research team includes a mix of software
engineers and scientists; of graduate students, postdoctoral
researchers, and staff; and of geographically and demographically
diverse individuals. We actively cultivate an inclusive work
environment. This position can focus on any aspect of software
engineering, including developing front-end interfaces to discover
and analyze data, backend systems to efficiently access biomedical
data, and/or DevOps to deploy and maintain software infrastructure.
REQUIREMENTS: Bachelor’s degree in Computer Science, Information
Systems or related field, or an equivalent combination of
education, training and/or experience. A degree in a biological or
chemical science may be accepted if accompanied with programming
education, training, and/or experience. Minimum of two years
experience in software application development and research
programming. Experience with software development in Python or
JavaScript. A demonstrated ability to apply the fundamentals of
software application development. Experience with version control,
including git and github. Please include code samples and/or a link
to a public code repository with examples of your work. PREFERRED
SKILLSET: Prior experience with the one or more of the following is
preferred: Familiarity with biomedical research and methodology,
especially genetics and genomics. Experience developing scalable
system architectures that adhere to good software engineering
principles Ability to tackle large, open-ended research questions
independently and as part of a team Bioinformatics or computational
biology experience Experience working within a diverse,
interdisciplinary team. Experience building or consuming web
service Application Programming Interfaces (APIs) for data
integration. Experience contributing to open source software
projects. Experience in LLM-based coding agents. In addition, for
applicants focusing on front-end development: JavaScript frameworks
(React, Vue.js, Angular, or similar), HTML5, CSS3, SASS/SCSS/LESS,
TypeScript Developing tools to share, visualize, and analyze
biomedical data Data visualization principles and methodology, and
a portfolio of projects applying these principles to create
Web-based static and interactive visualizations using libraries
like D3.js or Vega User interface (UI) and user experience (UX)
design Cloud-based deployment For applicants focusing on backend
development or DevOps roles: Elasticsearch MongoDB Postgres Nginx
Linux server (Ubuntu Server) administration Amazon Web Services
setup and management Automated deployment Docker/Docker-compose,
and automated CI/CD workflow setup Ansibleâ?? LOCATION: La Jolla,
California, or Remote Employment within the United States. In rare
circumstances, candidates outside the United States will be
considered. PHYSICAL REQUIREMENTS : This position works in an
office environment. Further details of the physical requirements of
established essential functions for this position will be
addressed/discussed during the interview process. COMPENSATION: The
expected hiring range for this position is $70,304 to $80,000 per
year, commensurate with experience. Consideration will be given to
experience that exceeds the listed requirements. COMPREHENSIVE
BENEFITS INCLUDE: Employer Contributed Retirement Plan – Depending
on eligibility, employees receive an employer contributed
retirement plan (no employee contribution required) and the option
to contribute to a 403(b) (which is similar to a 401(k) using your
own pre or post-tax dollars) Full Suite of Health and Welfare plans
including three medical plan options (including an HSA available
option), dental, vision, life insurance, disability, EAP and more
Access to Flexible Spending Accounts (Medical/Dependent Care)
Competitive vacation and sick leave policies Free, on-site parking
The above statements describe the level of work performed and
expected in general terms.â?¯ The statements are not intended to
list all the responsibilities, duties and/or skills required of
employees so classified, and the content herein is subject to
change due to the business needs of Scripps Research, with or
without notice.�� Furthermore, nothing in this job description
shall be interpreted to be in conflict with or to eliminate or
modify in any way the employment-at-will status of Scripps Research
staff.â?¯ EEO Statement: The Scripps Research Institute is an Equal
Opportunity Employer. We promote diversity of thought, culture, and
background in the fields of science. All qualified applicants are
encouraged to apply and will receive consideration for employment
without regard to race, color, religion, sex, sexual orientation,
gender identity, national origin, disability, protected veteran
status, or any other legally protected characteristic or
status.
Keywords: Scripps Research, Escondido , RESEARCH PROGRAMMER II (SOFTWARE ENGINEER) - C. Wu Lab, IT / Software / Systems , San Diego, California
